Functional clusters

Information

  • Type MapMan
  • Description Secondary metabolism.terpenoids.isoprenyl diphosphate biosynthesis.isoprenyl diphosphate synthase (IDS)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cenchrus purpureus GWHAORA00000005 1 CH_cpu_736 2 2 0.000309138
Digitaria exilis Dexi_CM05836_chr05A 1 CH_dex_747 2 2 0.000935766
Eragrostis curvula Contig4 1 CH_ecu_678 3 47 0.000364869
Hordeum vulgare chr5H 1 CH_hvu_407 2 2 0.000405836
Lolium perenne Lp_chr1_0 1 CH_lpe_453 2 3 0.000964227
Sequoiadendron giganteum chr7 1 CH_sgi_568 3 4 0.000000498328
Solanum lycopersicum SL4.0ch02 1 CH_sly_160 3 3 0.000000103353
Cenchrus purpureus GWHAORA00000005 2 CH_cpu_736 2 2 0.000309138
Digitaria exilis Dexi_CM05836_chr05A 2 CH_dex_747 2 2 0.000935766
Eragrostis curvula Contig4 2 CH_ecu_678 3 47 0.000364869
Hordeum vulgare chr5H 2 CH_hvu_407 2 2 0.000405836
Lolium perenne Lp_chr1_0 2 CH_lpe_453 2 3 0.000964227
Sequoiadendron giganteum chr7 2 CH_sgi_568 3 4 0.000000498328
Solanum lycopersicum SL4.0ch02 2 CH_sly_160 3 3 0.000000103353

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001