Functional clusters
Information
- Type MapMan
- Description Secondary metabolism.terpenoids.methylerythritol phosphate (MEP) pathway.4-hydroxy-3-methylbut-2-enyl diphosphate synthase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr8 | 1 | CH_asa_450 | 3 | 16 | 0.0000705638 |
| Eragrostis curvula | 1 | 1 | CH_ecu_803 | 2 | 7 | 0.000814143 |
| Secale cereale | GWHASIY00000006 | 1 | CH_sce_504 | 2 | 2 | 0.000045529 |
| Allium sativum | chr8 | 2 | CH_asa_450 | 3 | 16 | 0.0000705638 |
| Eragrostis curvula | 1 | 2 | CH_ecu_803 | 2 | 7 | 0.000814143 |
| Secale cereale | GWHASIY00000006 | 2 | CH_sce_504 | 2 | 2 | 0.000045529 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |