Functional clusters

Information

  • Type MapMan
  • Description Secondary metabolism.terpenoids.methylerythritol phosphate (MEP) pathway.1-deoxy-d-xylulose 5-phosphate import.D-xylulose kinase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Asparagus officinalis AsparagusV1_03 1 CH_aof_85 2 2 0.0000755915
Physcomitrium patens Chr04 1 CH_ppa_168 2 2 0.000183818
Solanum lycopersicum SL4.0ch04 1 CH_sly_332 2 2 0.0000586941
Saccharum spontaneum Chr2B 1 CH_ssp_1008 2 2 0.000357884
Asparagus officinalis AsparagusV1_03 2 CH_aof_85 2 2 0.0000755915
Physcomitrium patens Chr04 2 CH_ppa_168 2 2 0.000183818
Solanum lycopersicum SL4.0ch04 2 CH_sly_332 2 2 0.0000586941
Saccharum spontaneum Chr2B 2 CH_ssp_1008 2 2 0.000357884

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001