Functional clusters

Information

  • Type MapMan
  • Description Coenzyme metabolism.prenylquinone biosynthesis.plastoquinone biosynthesis.MSBQ-methyltransferase (APG1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr7_2 1 CH_asa_549 2 2 0.000116261
Eragrostis curvula Contig33 1 CH_ecu_818 3 62 0.000850404
Elaeis guineensis EG5.1_Chr1 1 CH_egu_171 2 2 0.0000947329
Lolium perenne Lp_chr3_0 1 CH_lpe_322 2 2 0.000192855
Magnolia biondii Chr04 1 CH_mbi_352 2 2 0.0000485661
Sorghum bicolor Chr08 1 CH_sbi_418 2 5 0.000586631
Allium sativum chr7_2 2 CH_asa_549 2 2 0.000116261
Eragrostis curvula Contig33 2 CH_ecu_818 3 62 0.000850404
Elaeis guineensis EG5.1_Chr1 2 CH_egu_171 2 2 0.0000947329
Lolium perenne Lp_chr3_0 2 CH_lpe_322 2 2 0.000192855
Magnolia biondii Chr04 2 CH_mbi_352 2 2 0.0000485661
Sorghum bicolor Chr08 2 CH_sbi_418 2 5 0.000586631

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001