Functional clusters

Information

  • Type MapMan
  • Description Coenzyme metabolism.tetrahydrofolate metabolism.gamma-glutamyl hydrolase (GGH)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana Chr1 1 CH_ath_82 3 4 0.00000000492466
Calamus simplicifolius scaffold361 1 CH_calsi_55 3 5 0.0000000675985
Cenchrus purpureus GWHAORA00000008 1 CH_cpu_695 2 2 0.000185483
Cenchrus purpureus GWHAORA00000001 1 CH_cpu_696 2 2 0.000185483
Digitaria exilis Dexi_CM05836_chr03A 1 CH_dex_530 2 2 0.000200521
Digitaria exilis Dexi_CM05836_chr03B 1 CH_dex_531 2 2 0.000200521
Glycine max Gm13 1 CH_gma_330 2 2 0.0000379557
Miscanthus sinensis Chr16 1 CH_msi_123 3 3 0.0000000155517
Miscanthus sinensis Chr17 1 CH_msi_514 2 2 0.000321989
Sorghum bicolor Chr09 1 CH_sbi_103 3 3 0.00000000516309
Sequoiadendron giganteum chr11 1 CH_sgi_1154 2 2 0.000146145
Solanum lycopersicum SL4.0ch07 1 CH_sly_434 2 2 0.000176082
Saccharum spontaneum Chr7D 1 CH_ssp_1026 2 3 0.000357884
Saccharum spontaneum Chr7B 1 CH_ssp_204 3 4 0.0000000683081
Arabidopsis thaliana Chr1 2 CH_ath_82 3 4 0.00000000492466
Calamus simplicifolius scaffold361 2 CH_calsi_55 3 5 0.0000000675985
Cenchrus purpureus GWHAORA00000008 2 CH_cpu_695 2 2 0.000185483
Cenchrus purpureus GWHAORA00000001 2 CH_cpu_696 2 2 0.000185483
Digitaria exilis Dexi_CM05836_chr03A 2 CH_dex_530 2 2 0.000200521
Digitaria exilis Dexi_CM05836_chr03B 2 CH_dex_531 2 2 0.000200521
Glycine max Gm13 2 CH_gma_330 2 2 0.0000379557
Miscanthus sinensis Chr16 2 CH_msi_123 3 3 0.0000000155517
Miscanthus sinensis Chr17 2 CH_msi_514 2 2 0.000321989
Sorghum bicolor Chr09 2 CH_sbi_103 3 3 0.00000000516309
Sequoiadendron giganteum chr11 2 CH_sgi_1154 2 2 0.000146145
Solanum lycopersicum SL4.0ch07 2 CH_sly_434 2 2 0.000176082
Saccharum spontaneum Chr7D 2 CH_ssp_1026 2 3 0.000357884
Saccharum spontaneum Chr7B 2 CH_ssp_204 3 4 0.0000000683081

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001