Functional clusters
Information
- Type MapMan
- Description Coenzyme metabolism.tetrahydrofolate metabolism.gamma-glutamyl hydrolase (GGH)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis thaliana | Chr1 | 1 | CH_ath_82 | 3 | 4 | 0.00000000492466 |
Calamus simplicifolius | scaffold361 | 1 | CH_calsi_55 | 3 | 5 | 0.0000000675985 |
Cenchrus purpureus | GWHAORA00000008 | 1 | CH_cpu_695 | 2 | 2 | 0.000185483 |
Cenchrus purpureus | GWHAORA00000001 | 1 | CH_cpu_696 | 2 | 2 | 0.000185483 |
Digitaria exilis | Dexi_CM05836_chr03A | 1 | CH_dex_530 | 2 | 2 | 0.000200521 |
Digitaria exilis | Dexi_CM05836_chr03B | 1 | CH_dex_531 | 2 | 2 | 0.000200521 |
Glycine max | Gm13 | 1 | CH_gma_330 | 2 | 2 | 0.0000379557 |
Miscanthus sinensis | Chr16 | 1 | CH_msi_123 | 3 | 3 | 0.0000000155517 |
Miscanthus sinensis | Chr17 | 1 | CH_msi_514 | 2 | 2 | 0.000321989 |
Sorghum bicolor | Chr09 | 1 | CH_sbi_103 | 3 | 3 | 0.00000000516309 |
Sequoiadendron giganteum | chr11 | 1 | CH_sgi_1154 | 2 | 2 | 0.000146145 |
Solanum lycopersicum | SL4.0ch07 | 1 | CH_sly_434 | 2 | 2 | 0.000176082 |
Saccharum spontaneum | Chr7D | 1 | CH_ssp_1026 | 2 | 3 | 0.000357884 |
Saccharum spontaneum | Chr7B | 1 | CH_ssp_204 | 3 | 4 | 0.0000000683081 |
Arabidopsis thaliana | Chr1 | 2 | CH_ath_82 | 3 | 4 | 0.00000000492466 |
Calamus simplicifolius | scaffold361 | 2 | CH_calsi_55 | 3 | 5 | 0.0000000675985 |
Cenchrus purpureus | GWHAORA00000008 | 2 | CH_cpu_695 | 2 | 2 | 0.000185483 |
Cenchrus purpureus | GWHAORA00000001 | 2 | CH_cpu_696 | 2 | 2 | 0.000185483 |
Digitaria exilis | Dexi_CM05836_chr03A | 2 | CH_dex_530 | 2 | 2 | 0.000200521 |
Digitaria exilis | Dexi_CM05836_chr03B | 2 | CH_dex_531 | 2 | 2 | 0.000200521 |
Glycine max | Gm13 | 2 | CH_gma_330 | 2 | 2 | 0.0000379557 |
Miscanthus sinensis | Chr16 | 2 | CH_msi_123 | 3 | 3 | 0.0000000155517 |
Miscanthus sinensis | Chr17 | 2 | CH_msi_514 | 2 | 2 | 0.000321989 |
Sorghum bicolor | Chr09 | 2 | CH_sbi_103 | 3 | 3 | 0.00000000516309 |
Sequoiadendron giganteum | chr11 | 2 | CH_sgi_1154 | 2 | 2 | 0.000146145 |
Solanum lycopersicum | SL4.0ch07 | 2 | CH_sly_434 | 2 | 2 | 0.000176082 |
Saccharum spontaneum | Chr7D | 2 | CH_ssp_1026 | 2 | 3 | 0.000357884 |
Saccharum spontaneum | Chr7B | 2 | CH_ssp_204 | 3 | 4 | 0.0000000683081 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |