Functional clusters
Information
- Type MapMan
- Description Coenzyme metabolism.coenzyme A biosynthesis.phosphopantothenoylcysteine decarboxylase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00078 | 1 | CH_atr_117 | 3 | 7 | 0.00000132496 |
| Glycine max | Gm18 | 1 | CH_gma_64 | 4 | 4 | 0.0000000000114835 |
| Musa acuminata | chr09 | 1 | CH_mac_161 | 2 | 2 | 0.000170455 |
| Magnolia biondii | Chr14 | 1 | CH_mbi_131 | 3 | 3 | 0.0000000141523 |
| Sorghum bicolor | Chr10 | 1 | CH_sbi_149 | 3 | 4 | 0.000000206509 |
| Sequoiadendron giganteum | chr4 | 1 | CH_sgi_1153 | 2 | 2 | 0.000146145 |
| Saccharum spontaneum | Chr3A | 1 | CH_ssp_445 | 3 | 9 | 0.00000401531 |
| Amborella trichopoda | AmTr_v1.0_scaffold00078 | 2 | CH_atr_117 | 3 | 7 | 0.00000132496 |
| Glycine max | Gm18 | 2 | CH_gma_64 | 4 | 4 | 0.0000000000114835 |
| Musa acuminata | chr09 | 2 | CH_mac_161 | 2 | 2 | 0.000170455 |
| Magnolia biondii | Chr14 | 2 | CH_mbi_131 | 3 | 3 | 0.0000000141523 |
| Sorghum bicolor | Chr10 | 2 | CH_sbi_149 | 3 | 4 | 0.000000206509 |
| Sequoiadendron giganteum | chr4 | 2 | CH_sgi_1153 | 2 | 2 | 0.000146145 |
| Saccharum spontaneum | Chr3A | 2 | CH_ssp_445 | 3 | 9 | 0.00000401531 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |