Functional clusters

Information

  • Type MapMan
  • Description Coenzyme metabolism.S-adenosyl methionine (SAM) cycle.S-adenosyl methionine synthetase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brachypodium distachyon Bd2 1 CH_bdi_260 2 2 0.000185002
Hordeum vulgare chr6H 1 CH_hvu_144 3 5 0.0000000988167
Magnolia biondii Chr19 1 CH_mbi_571 2 3 0.000437077
Physcomitrium patens Chr22 1 CH_ppa_36 3 4 0.00000022525
Secale cereale GWHASIY00000006 1 CH_sce_745 2 2 0.000273174
Sequoiadendron giganteum chr1 1 CH_sgi_584 3 8 0.000000797233
Triticum dicoccoides 6A 1 CH_tdi_617 2 2 0.000831181
Triticum dicoccoides 6B 1 CH_tdi_618 2 2 0.000831181
Brachypodium distachyon Bd2 2 CH_bdi_260 2 2 0.000185002
Hordeum vulgare chr6H 2 CH_hvu_144 3 5 0.0000000988167
Magnolia biondii Chr19 2 CH_mbi_571 2 3 0.000437077
Physcomitrium patens Chr22 2 CH_ppa_36 3 4 0.00000022525
Secale cereale GWHASIY00000006 2 CH_sce_745 2 2 0.000273174
Sequoiadendron giganteum chr1 2 CH_sgi_584 3 8 0.000000797233
Triticum dicoccoides 6A 2 CH_tdi_617 2 2 0.000831181
Triticum dicoccoides 6B 2 CH_tdi_618 2 2 0.000831181

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001