Functional clusters

Information

  • Type MapMan
  • Description Coenzyme metabolism.iron-sulfur cluster assembly machinery.mitochondrial ISC system

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Saccharum spontaneum Chr2B 1 CH_ssp_382 4 9 0.00000161969
Saccharum spontaneum Chr2B 2 CH_ssp_382 4 9 0.00000161969

Available child term results

Ontology identifier Description Number of clusters
7.11.2.1.2 Coenzyme metabolism.iron-sulfur cluster assembly machinery.mitochondrial ISC system.assembly phase.scaffold protein (ISU) 10
7.11.2.1.6 Coenzyme metabolism.iron-sulfur cluster assembly machinery.mitochondrial ISC system.assembly phase.adrenodoxin oxidoreductase 10
7.11.2.2.4 Coenzyme metabolism.iron-sulfur cluster assembly machinery.mitochondrial ISC system.transfer phase.assembly factor (IBA57) 4
7.11.2.2.5 Coenzyme metabolism.iron-sulfur cluster assembly machinery.mitochondrial ISC system.transfer phase.chaperone (HSCA) 6
7.11.2.3.1 Coenzyme metabolism.iron-sulfur cluster assembly machinery.mitochondrial ISC system.export machinery.transport protein (ATM) 4
7.11.2.3.2 Coenzyme metabolism.iron-sulfur cluster assembly machinery.mitochondrial ISC system.export machinery.sulfhydryl oxidase (ERV1) 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001