Functional clusters
Information
- Type MapMan
- Description Nucleotide metabolism.purines.extracellular ATP.adenosine proton symporter (ENT3)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr5 | 1 | CH_asa_236 | 3 | 3 | 0.000000644305 |
| Aegilops tauschii | 2D | 1 | CH_ata_266 | 2 | 4 | 0.000295436 |
| Arabidopsis thaliana | Chr4 | 1 | CH_ath_76 | 4 | 16 | 0.00000000192507 |
| Amborella trichopoda | AmTr_v1.0_scaffold00072 | 1 | CH_atr_208 | 2 | 2 | 0.0000794407 |
| Cenchrus purpureus | GWHAORA00000002 | 1 | CH_cpu_295 | 3 | 3 | 0.000000120415 |
| Cenchrus purpureus | GWHAORA00000010 | 1 | CH_cpu_46 | 6 | 18 | 9.90092e-16 |
| Digitaria exilis | Dexi_CM05836_chr02B | 1 | CH_dex_177 | 3 | 3 | 0.0000000586388 |
| Digitaria exilis | Dexi_CM05836_chr02A | 1 | CH_dex_178 | 3 | 3 | 0.0000000586388 |
| Eragrostis curvula | Contig50 | 1 | CH_ecu_350 | 4 | 33 | 0.0000014978 |
| Eragrostis curvula | 4 | 1 | CH_ecu_42 | 6 | 6 | 4.14098e-19 |
| Glycine max | Gm15 | 1 | CH_gma_527 | 2 | 2 | 0.000379557 |
| Hordeum vulgare | chr2H | 1 | CH_hvu_396 | 2 | 5 | 0.000405811 |
| Miscanthus sinensis | Chr04 | 1 | CH_msi_72 | 4 | 6 | 0.000000000105146 |
| Oryza alta | GWHAZTO00000007 | 1 | CH_oal_120 | 3 | 3 | 0.0000000121824 |
| Oryza alta | GWHAZTO00000019 | 1 | CH_oal_121 | 3 | 3 | 0.0000000121824 |
| Oryza brachyantha | 7 | 1 | CH_obr_66 | 3 | 4 | 0.0000000214086 |
| Oryza sativa ssp. indica | Chr7 | 1 | CH_osaindica_81 | 3 | 4 | 0.0000000160131 |
| Oryza sativa Kitaake | Chr7 | 1 | CH_osak_141 | 3 | 4 | 0.0000000190085 |
| Oryza sativa ssp. japonica | chr07 | 1 | CH_osa_66 | 3 | 3 | 0.00000000418381 |
| Oropetium thomaeum | Chromosome_7 | 1 | CH_oth_12 | 4 | 4 | 0.00000000000108224 |
| Populus trichocarpa | Chr04 | 1 | CH_ptr_167 | 3 | 3 | 0.0000000501143 |
| Sorghum bicolor | Chr02 | 1 | CH_sbi_71 | 4 | 9 | 0.0000000000763265 |
| Secale cereale | GWHASIY00000002 | 1 | CH_sce_700 | 2 | 4 | 0.000273162 |
| Solanum lycopersicum | SL4.0ch02 | 1 | CH_sly_185 | 3 | 5 | 0.000000516688 |
| Saccharum spontaneum | Chr2B | 1 | CH_ssp_292 | 3 | 4 | 0.000000409834 |
| Saccharum spontaneum | Chr2A | 1 | CH_ssp_95 | 4 | 6 | 0.000000000128334 |
| Triticum aestivum | Chr2A | 1 | CH_tae_1146 | 2 | 2 | 0.000187066 |
| Triticum dicoccoides | 2A | 1 | CH_tdi_463 | 2 | 2 | 0.00017811 |
| Triticum dicoccoides | 2B | 1 | CH_tdi_559 | 2 | 3 | 0.000534312 |
| Triticum turgidum | chr2B | 1 | CH_ttu_511 | 2 | 2 | 0.0000937603 |
| Vanilla planifolia | CM028154.1 | 1 | CH_vpl_70 | 3 | 4 | 0.00000114635 |
| Zea mays B73 | 7 | 1 | CH_zma_69 | 3 | 6 | 0.0000000784282 |
| Allium sativum | chr5 | 2 | CH_asa_236 | 3 | 3 | 0.000000644305 |
| Aegilops tauschii | 2D | 2 | CH_ata_266 | 2 | 4 | 0.000295436 |
| Arabidopsis thaliana | Chr4 | 2 | CH_ath_76 | 4 | 16 | 0.00000000192507 |
| Amborella trichopoda | AmTr_v1.0_scaffold00072 | 2 | CH_atr_208 | 2 | 2 | 0.0000794407 |
| Cenchrus purpureus | GWHAORA00000002 | 2 | CH_cpu_295 | 3 | 3 | 0.000000120415 |
| Cenchrus purpureus | GWHAORA00000010 | 2 | CH_cpu_46 | 6 | 18 | 9.90092e-16 |
| Digitaria exilis | Dexi_CM05836_chr02B | 2 | CH_dex_177 | 3 | 3 | 0.0000000586388 |
| Digitaria exilis | Dexi_CM05836_chr02A | 2 | CH_dex_178 | 3 | 3 | 0.0000000586388 |
| Eragrostis curvula | Contig50 | 2 | CH_ecu_350 | 4 | 33 | 0.0000014978 |
| Eragrostis curvula | 4 | 2 | CH_ecu_42 | 6 | 6 | 4.14098e-19 |
| Glycine max | Gm15 | 2 | CH_gma_527 | 2 | 2 | 0.000379557 |
| Hordeum vulgare | chr2H | 2 | CH_hvu_396 | 2 | 5 | 0.000405811 |
| Miscanthus sinensis | Chr04 | 2 | CH_msi_72 | 4 | 6 | 0.000000000105146 |
| Oryza alta | GWHAZTO00000007 | 2 | CH_oal_120 | 3 | 3 | 0.0000000121824 |
| Oryza alta | GWHAZTO00000019 | 2 | CH_oal_121 | 3 | 3 | 0.0000000121824 |
| Oryza brachyantha | 7 | 2 | CH_obr_66 | 3 | 4 | 0.0000000214086 |
| Oryza sativa ssp. indica | Chr7 | 2 | CH_osaindica_81 | 3 | 4 | 0.0000000160131 |
| Oryza sativa Kitaake | Chr7 | 2 | CH_osak_141 | 3 | 4 | 0.0000000190085 |
| Oryza sativa ssp. japonica | chr07 | 2 | CH_osa_66 | 3 | 3 | 0.00000000418381 |
| Oropetium thomaeum | Chromosome_7 | 2 | CH_oth_12 | 4 | 4 | 0.00000000000108224 |
| Populus trichocarpa | Chr04 | 2 | CH_ptr_167 | 3 | 3 | 0.0000000501143 |
| Sorghum bicolor | Chr02 | 2 | CH_sbi_71 | 4 | 9 | 0.0000000000763265 |
| Secale cereale | GWHASIY00000002 | 2 | CH_sce_700 | 2 | 4 | 0.000273162 |
| Solanum lycopersicum | SL4.0ch02 | 2 | CH_sly_185 | 3 | 5 | 0.000000516688 |
| Saccharum spontaneum | Chr2B | 2 | CH_ssp_292 | 3 | 4 | 0.000000409834 |
| Saccharum spontaneum | Chr2A | 2 | CH_ssp_95 | 4 | 6 | 0.000000000128334 |
| Triticum aestivum | Chr2A | 2 | CH_tae_1146 | 2 | 2 | 0.000187066 |
| Triticum dicoccoides | 2A | 2 | CH_tdi_463 | 2 | 2 | 0.00017811 |
| Triticum dicoccoides | 2B | 2 | CH_tdi_559 | 2 | 3 | 0.000534312 |
| Triticum turgidum | chr2B | 2 | CH_ttu_511 | 2 | 2 | 0.0000937603 |
| Vanilla planifolia | CM028154.1 | 2 | CH_vpl_70 | 3 | 4 | 0.00000114635 |
| Zea mays B73 | 7 | 2 | CH_zma_69 | 3 | 6 | 0.0000000784282 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |