Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.lipid degradation.phospholipase activities.phospholipase D activities.phospholipase D (PLD-alpha)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Chara braunii BFEA01000169 1 CH_cbr_20 3 4 0.0000000310409
Glycine max Gm06 1 CH_gma_561 2 2 0.000569336
Oryza alta GWHAZTO00000018 1 CH_oal_256 3 6 0.00000200967
Oryza brachyantha 6 1 CH_obr_81 3 3 0.000000107046
Oryza sativa ssp. indica Chr6 1 CH_osaindica_106 3 3 0.000000140118
Oryza sativa Kitaake Chr6 1 CH_osak_174 3 3 0.000000166329
Oryza sativa ssp. japonica chr06 1 CH_osa_102 3 3 0.0000000836762
Secale cereale GWHASIY00000006 1 CH_sce_454 3 6 0.0000422548
Sequoiadendron giganteum chr2 1 CH_sgi_477 3 5 0.0000000355966
Solanum lycopersicum SL4.0ch08 1 CH_sly_520 2 2 0.000586941
Chara braunii BFEA01000169 2 CH_cbr_20 3 4 0.0000000310409
Glycine max Gm06 2 CH_gma_561 2 2 0.000569336
Oryza alta GWHAZTO00000018 2 CH_oal_256 3 6 0.00000200967
Oryza brachyantha 6 2 CH_obr_81 3 3 0.000000107046
Oryza sativa ssp. indica Chr6 2 CH_osaindica_106 3 3 0.000000140118
Oryza sativa Kitaake Chr6 2 CH_osak_174 3 3 0.000000166329
Oryza sativa ssp. japonica chr06 2 CH_osa_102 3 3 0.0000000836762
Secale cereale GWHASIY00000006 2 CH_sce_454 3 6 0.0000422548
Sequoiadendron giganteum chr2 2 CH_sgi_477 3 5 0.0000000355966
Solanum lycopersicum SL4.0ch08 2 CH_sly_520 2 2 0.000586941

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001