Functional clusters
Information
- Type MapMan
- Description Lipid metabolism.glycerolipid biosynthesis.phosphatidate.endoplasmic reticulum phosphatidate biosynthesis.lysophosphatidate acyltransferase (LPAT)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr2 | 1 | CH_asa_736 | 2 | 2 | 0.000387537 |
| Sequoiadendron giganteum | chr7 | 1 | CH_sgi_1313 | 2 | 2 | 0.000487151 |
| Sequoiadendron giganteum | chr1 | 1 | CH_sgi_560 | 3 | 5 | 0.00000035594 |
| Allium sativum | chr2 | 2 | CH_asa_736 | 2 | 2 | 0.000387537 |
| Sequoiadendron giganteum | chr7 | 2 | CH_sgi_1313 | 2 | 2 | 0.000487151 |
| Sequoiadendron giganteum | chr1 | 2 | CH_sgi_560 | 3 | 5 | 0.00000035594 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |