Functional clusters
Information
- Type MapMan
- Description Lipid metabolism.glycerolipid biosynthesis.phosphatidate.endoplasmic reticulum phosphatidate biosynthesis.glycerol-3-phosphate acyltransferase (GPAT9)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Asparagus officinalis | AsparagusV1_03 | 1 | CH_aof_197 | 2 | 2 | 0.000755915 |
Magnolia biondii | Chr02 | 1 | CH_mbi_664 | 2 | 4 | 0.000874119 |
Phyllostachys edulis | hic_scaffold_10 | 1 | CH_ped_410 | 2 | 3 | 0.000366698 |
Saccharum spontaneum | Chr2D | 1 | CH_ssp_432 | 3 | 12 | 0.00000375578 |
Vanilla planifolia | CM028154.1 | 1 | CH_vpl_265 | 2 | 2 | 0.000221664 |
Asparagus officinalis | AsparagusV1_03 | 2 | CH_aof_197 | 2 | 2 | 0.000755915 |
Magnolia biondii | Chr02 | 2 | CH_mbi_664 | 2 | 4 | 0.000874119 |
Phyllostachys edulis | hic_scaffold_10 | 2 | CH_ped_410 | 2 | 3 | 0.000366698 |
Saccharum spontaneum | Chr2D | 2 | CH_ssp_432 | 3 | 12 | 0.00000375578 |
Vanilla planifolia | CM028154.1 | 2 | CH_vpl_265 | 2 | 2 | 0.000221664 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |