Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.fatty acid biosynthesis.plastidial fatty acid synthase (ptFAS) system

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Digitaria exilis Dexi_CM05836_chrUA 1 CH_dex_343 3 3 0.0000165529
Digitaria exilis Dexi_CM05836_chrUA 2 CH_dex_343 3 3 0.0000165529

Available child term results

Ontology identifier Description Number of clusters
5.1.4.1 Lipid metabolism.fatty acid biosynthesis.plastidial fatty acid synthase (ptFAS) system.acyl carrier protein (ptACP) 4
5.1.4.2.1 Lipid metabolism.fatty acid biosynthesis.plastidial fatty acid synthase (ptFAS) system.ketoacyl-ACP synthase (ptKAS) activities.ketoacyl-ACP synthase I 10
5.1.4.2.3 Lipid metabolism.fatty acid biosynthesis.plastidial fatty acid synthase (ptFAS) system.ketoacyl-ACP synthase (ptKAS) activities.ketoacyl-ACP synthase III 2
5.1.4.3 Lipid metabolism.fatty acid biosynthesis.plastidial fatty acid synthase (ptFAS) system.hydroxyacyl-ACP dehydratase (ptHD) 2
5.1.4.4 Lipid metabolism.fatty acid biosynthesis.plastidial fatty acid synthase (ptFAS) system.ketoacyl-ACP reductase (KAR) 2
5.1.4.6.1 Lipid metabolism.fatty acid biosynthesis.plastidial fatty acid synthase (ptFAS) system.elongation of exogenous fatty acid chains.medium-chain acyl-ACP synthetase 12
5.1.4.7.1 Lipid metabolism.fatty acid biosynthesis.plastidial fatty acid synthase (ptFAS) system.termination of fatty acid chains.oleoyl-ACP thioesterase (FATA) 6
5.1.4.7.2 Lipid metabolism.fatty acid biosynthesis.plastidial fatty acid synthase (ptFAS) system.termination of fatty acid chains.palmitoyl-ACP thioesterase (FATB) 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001