Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.degradation.branched-chain amino acid.valine.methylmalonate-semialdehyde dehydrogenase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Asparagus officinalis AsparagusV1_03 1 CH_aof_83 2 2 0.0000755915
Phyllostachys edulis hic_scaffold_4 1 CH_ped_333 2 2 0.000122237
Populus trichocarpa Chr09 1 CH_ptr_505 2 2 0.000578001
Asparagus officinalis AsparagusV1_03 2 CH_aof_83 2 2 0.0000755915
Phyllostachys edulis hic_scaffold_4 2 CH_ped_333 2 2 0.000122237
Populus trichocarpa Chr09 2 CH_ptr_505 2 2 0.000578001

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001