Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.biosynthesis.shikimate family.tryptophan.indole-3-glycerol phosphate synthase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr2 1 CH_asa_634 2 2 0.000232522
Oryza alta GWHAZTO00000016 1 CH_oal_683 2 2 0.000423178
Sequoiadendron giganteum chr7 1 CH_sgi_483 3 3 0.0000000355983
Saccharum spontaneum Chr5A 1 CH_ssp_870 3 13 0.000236274
Allium sativum chr2 2 CH_asa_634 2 2 0.000232522
Oryza alta GWHAZTO00000016 2 CH_oal_683 2 2 0.000423178
Sequoiadendron giganteum chr7 2 CH_sgi_483 3 3 0.0000000355983
Saccharum spontaneum Chr5A 2 CH_ssp_870 3 13 0.000236274

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001