Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.biosynthesis.serine family.non-photorespiratory serine.phosphoserine phosphatase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Asparagus officinalis AsparagusV1_10 1 CH_aof_167 2 2 0.000453549
Cenchrus purpureus GWHAORA00000001 1 CH_cpu_169 5 31 0.000000000292696
Digitaria exilis Dexi_CM05836_chr08B 1 CH_dex_160 3 4 0.0000000268055
Miscanthus sinensis Chr08 1 CH_msi_433 2 2 0.000193193
Panicum hallii Chr03 1 CH_pha_362 2 2 0.000348665
Secale cereale GWHASIY00000002 1 CH_sce_632 2 2 0.000136587
Vanilla planifolia CM028154.1 1 CH_vpl_243 2 3 0.000221656
Asparagus officinalis AsparagusV1_10 2 CH_aof_167 2 2 0.000453549
Cenchrus purpureus GWHAORA00000001 2 CH_cpu_169 5 31 0.000000000292696
Digitaria exilis Dexi_CM05836_chr08B 2 CH_dex_160 3 4 0.0000000268055
Miscanthus sinensis Chr08 2 CH_msi_433 2 2 0.000193193
Panicum hallii Chr03 2 CH_pha_362 2 2 0.000348665
Secale cereale GWHASIY00000002 2 CH_sce_632 2 2 0.000136587
Vanilla planifolia CM028154.1 2 CH_vpl_243 2 3 0.000221656

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001