Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.isoleucine.valine/leucine/isoleucine aminotransferase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana Chr1 1 CH_ath_368 2 2 0.000429738
Amborella trichopoda AmTr_v1.0_scaffold00044 1 CH_atr_108 3 7 0.000000757172
Calamus simplicifolius scaffold495 1 CH_calsi_202 2 3 0.00020139
Chara braunii BFEA01000002 1 CH_cbr_60 2 2 0.0000719269
Elaeis guineensis EG5.1_Chr15 1 CH_egu_212 2 2 0.000284199
Glycine max Gm08 1 CH_gma_230 3 5 0.00000181486
Musa acuminata chr03 1 CH_mac_173 2 2 0.000340909
Miscanthus sinensis Chr01 1 CH_msi_536 2 2 0.000482983
Oryza alta GWHAZTO00000016 1 CH_oal_769 2 2 0.000725448
Populus trichocarpa Chr09 1 CH_ptr_422 2 2 0.000346801
Zea mays B104 scaffold9.2511 1 CH_zma-b104_40 2 3 0.000914216
Arabidopsis thaliana Chr1 2 CH_ath_368 2 2 0.000429738
Amborella trichopoda AmTr_v1.0_scaffold00044 2 CH_atr_108 3 7 0.000000757172
Calamus simplicifolius scaffold495 2 CH_calsi_202 2 3 0.00020139
Chara braunii BFEA01000002 2 CH_cbr_60 2 2 0.0000719269
Elaeis guineensis EG5.1_Chr15 2 CH_egu_212 2 2 0.000284199
Glycine max Gm08 2 CH_gma_230 3 5 0.00000181486
Musa acuminata chr03 2 CH_mac_173 2 2 0.000340909
Miscanthus sinensis Chr01 2 CH_msi_536 2 2 0.000482983
Oryza alta GWHAZTO00000016 2 CH_oal_769 2 2 0.000725448
Populus trichocarpa Chr09 2 CH_ptr_422 2 2 0.000346801
Zea mays B104 scaffold9.2511 2 CH_zma-b104_40 2 3 0.000914216

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001