Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.isoleucine.threonine reactive imine intermediate deaminase (RidA)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Ananas comosus LG07 1 CH_aco_123 2 4 0.000497636
Allium sativum chr7_2 1 CH_asa_194 4 15 0.000000117798
Allium sativum chr6 1 CH_asa_455 3 11 0.000081679
Amborella trichopoda AmTr_v1.0_scaffold00037 1 CH_atr_245 2 2 0.000238322
Ananas comosus LG07 2 CH_aco_123 2 4 0.000497636
Allium sativum chr7_2 2 CH_asa_194 4 15 0.000000117798
Allium sativum chr6 2 CH_asa_455 3 11 0.000081679
Amborella trichopoda AmTr_v1.0_scaffold00037 2 CH_atr_245 2 2 0.000238322

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001