Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.S-methylmethionine cycle.methionine S-methyltransferase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brachypodium distachyon Bd1 1 CH_bdi_276 2 2 0.000370005
Dioscorea dumetorum contig546 1 CH_ddu_251 2 2 0.000414536
Elaeis guineensis EG5.1_Chr9 1 CH_egu_27 3 3 0.0000000134621
Physcomitrium patens Chr11 1 CH_ppa_136 2 2 0.000183818
Triticum dicoccoides 4A 1 CH_tdi_289 3 7 0.00000554959
Vanilla planifolia CM028150.1 1 CH_vpl_252 2 2 0.000221664
Brachypodium distachyon Bd1 2 CH_bdi_276 2 2 0.000370005
Dioscorea dumetorum contig546 2 CH_ddu_251 2 2 0.000414536
Elaeis guineensis EG5.1_Chr9 2 CH_egu_27 3 3 0.0000000134621
Physcomitrium patens Chr11 2 CH_ppa_136 2 2 0.000183818
Triticum dicoccoides 4A 2 CH_tdi_289 3 7 0.00000554959
Vanilla planifolia CM028150.1 2 CH_vpl_252 2 2 0.000221664

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001