Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.proline.main pathway.pyrroline-5-carboxylate synthetase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr6 1 CH_asa_704 2 2 0.000387537
Allium sativum chr3 1 CH_asa_705 2 2 0.000387537
Chara braunii BFEA01000566 1 CH_cbr_56 2 2 0.0000719269
Elaeis guineensis EG5.1_Chr10 1 CH_egu_197 2 2 0.000284199
Magnolia biondii Chr14 1 CH_mbi_432 2 2 0.000145698
Selaginella moellendorffii scaffold_13 1 CH_smo_89 2 2 0.0000933707
Vanilla planifolia CM028150.1 1 CH_vpl_31 4 22 0.00000000884742
Allium sativum chr6 2 CH_asa_704 2 2 0.000387537
Allium sativum chr3 2 CH_asa_705 2 2 0.000387537
Chara braunii BFEA01000566 2 CH_cbr_56 2 2 0.0000719269
Elaeis guineensis EG5.1_Chr10 2 CH_egu_197 2 2 0.000284199
Magnolia biondii Chr14 2 CH_mbi_432 2 2 0.000145698
Selaginella moellendorffii scaffold_13 2 CH_smo_89 2 2 0.0000933707
Vanilla planifolia CM028150.1 2 CH_vpl_31 4 22 0.00000000884742

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001