Functional clusters

Information

  • Type MapMan
  • Description Carbohydrate metabolism.oligosaccharide metabolism.stachyose synthase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00003 1 CH_atr_214 2 2 0.0000794407
Saccharum spontaneum Chr6D 1 CH_ssp_1023 2 2 0.000357884
Saccharum spontaneum Chr6B 1 CH_ssp_203 3 4 0.0000000683081
Amborella trichopoda AmTr_v1.0_scaffold00003 2 CH_atr_214 2 2 0.0000794407
Saccharum spontaneum Chr6D 2 CH_ssp_1023 2 2 0.000357884
Saccharum spontaneum Chr6B 2 CH_ssp_203 3 4 0.0000000683081

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001