Functional clusters

Information

  • Type MapMan
  • Description Carbohydrate metabolism.oligosaccharide metabolism.galactinol synthase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Asparagus officinalis AsparagusV1_07 1 CH_aof_179 2 2 0.000453549
Aegilops tauschii 2D 1 CH_ata_291 3 35 0.000474892
Aegilops tauschii 7D 1 CH_ata_337 2 2 0.000738625
Lolium perenne Lp_chr2_0 1 CH_lpe_382 2 2 0.000482137
Secale cereale GWHASIY00000002 1 CH_sce_298 4 68 0.00000114994
Sequoiadendron giganteum chr6 1 CH_sgi_22 11 19 8.07558e-32
Triticum aestivum Chr2D 1 CH_tae_1352 3 28 0.000624586
Triticum aestivum Chr2A 1 CH_tae_1422 3 30 0.000773925
Triticum aestivum Chr2B 1 CH_tae_671 4 35 0.00000102664
Triticum dicoccoides 2A 1 CH_tdi_477 3 28 0.000242069
Asparagus officinalis AsparagusV1_07 2 CH_aof_179 2 2 0.000453549
Aegilops tauschii 2D 2 CH_ata_291 3 35 0.000474892
Aegilops tauschii 7D 2 CH_ata_337 2 2 0.000738625
Lolium perenne Lp_chr2_0 2 CH_lpe_382 2 2 0.000482137
Secale cereale GWHASIY00000002 2 CH_sce_298 4 68 0.00000114994
Sequoiadendron giganteum chr6 2 CH_sgi_22 11 19 8.07558e-32
Triticum aestivum Chr2D 2 CH_tae_1352 3 28 0.000624586
Triticum aestivum Chr2A 2 CH_tae_1422 3 30 0.000773925
Triticum aestivum Chr2B 2 CH_tae_671 4 35 0.00000102664
Triticum dicoccoides 2A 2 CH_tdi_477 3 28 0.000242069

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001