Functional clusters

Information

  • Type MapMan
  • Description Carbohydrate metabolism.trehalose metabolism.trehalase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr6 1 CH_asa_555 2 2 0.000116261
Elaeis guineensis EG5.1_Chr4 1 CH_egu_192 2 3 0.000284185
Miscanthus sinensis Chr01 1 CH_msi_478 2 3 0.000289782
Phyllostachys edulis hic_scaffold_5 1 CH_ped_111 3 3 0.0000000249036
Physcomitrium patens Chr24 1 CH_ppa_311 2 2 0.000612726
Populus trichocarpa Chr03 1 CH_ptr_456 2 2 0.000346801
Secale cereale GWHASIY00000001 1 CH_sce_612 2 3 0.000136584
Sequoiadendron giganteum chr8 1 CH_sgi_459 3 3 0.0000000142393
Selaginella moellendorffii scaffold_38 1 CH_smo_153 2 2 0.000560224
Allium sativum chr6 2 CH_asa_555 2 2 0.000116261
Elaeis guineensis EG5.1_Chr4 2 CH_egu_192 2 3 0.000284185
Miscanthus sinensis Chr01 2 CH_msi_478 2 3 0.000289782
Phyllostachys edulis hic_scaffold_5 2 CH_ped_111 3 3 0.0000000249036
Physcomitrium patens Chr24 2 CH_ppa_311 2 2 0.000612726
Populus trichocarpa Chr03 2 CH_ptr_456 2 2 0.000346801
Secale cereale GWHASIY00000001 2 CH_sce_612 2 3 0.000136584
Sequoiadendron giganteum chr8 2 CH_sgi_459 3 3 0.0000000142393
Selaginella moellendorffii scaffold_38 2 CH_smo_153 2 2 0.000560224

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001