Functional clusters

Information

  • Type MapMan
  • Description Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.starch-debranching activities.pullulanase (PU1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Dioscorea dumetorum contig119 1 CH_ddu_162 2 2 0.0000690894
Sequoiadendron giganteum chr7 1 CH_sgi_388 3 3 0.00000000355983
Solanum lycopersicum SL4.0ch11 1 CH_sly_302 2 2 0.0000586941
Saccharum spontaneum Chr5A 1 CH_ssp_564 3 26 0.0000221858
Dioscorea dumetorum contig119 2 CH_ddu_162 2 2 0.0000690894
Sequoiadendron giganteum chr7 2 CH_sgi_388 3 3 0.00000000355983
Solanum lycopersicum SL4.0ch11 2 CH_sly_302 2 2 0.0000586941
Saccharum spontaneum Chr5A 2 CH_ssp_564 3 26 0.0000221858

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001