Functional clusters

Information

  • Type MapMan
  • Description Carbohydrate metabolism.gluconeogenesis.pyruvate orthophosphate dikinase activity.regulatory pyruvate orthophosphate dikinase kinase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Calamus simplicifolius scaffold348 1 CH_calsi_250 2 2 0.000201396
Elaeis guineensis EG5.1_Chr1 1 CH_egu_167 2 2 0.0000947329
Miscanthus sinensis Chr04 1 CH_msi_121 3 3 0.0000000155517
Miscanthus sinensis Chr03 1 CH_msi_647 2 3 0.000965919
Oropetium thomaeum Chromosome_7 1 CH_oth_153 2 2 0.0000711845
Sorghum bicolor Chr02 1 CH_sbi_101 3 3 0.00000000516309
Saccharum spontaneum Chr2B 1 CH_ssp_1019 2 2 0.000357884
Zoysia japonica ssp. nagirizaki Zjn_sc00001.1 1 CH_zjn_151 2 2 0.000110986
Calamus simplicifolius scaffold348 2 CH_calsi_250 2 2 0.000201396
Elaeis guineensis EG5.1_Chr1 2 CH_egu_167 2 2 0.0000947329
Miscanthus sinensis Chr04 2 CH_msi_121 3 3 0.0000000155517
Miscanthus sinensis Chr03 2 CH_msi_647 2 3 0.000965919
Oropetium thomaeum Chromosome_7 2 CH_oth_153 2 2 0.0000711845
Sorghum bicolor Chr02 2 CH_sbi_101 3 3 0.00000000516309
Saccharum spontaneum Chr2B 2 CH_ssp_1019 2 2 0.000357884
Zoysia japonica ssp. nagirizaki Zjn_sc00001.1 2 CH_zjn_151 2 2 0.000110986

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001