Functional clusters

Information

  • Type MapMan
  • Description Carbohydrate metabolism.sucrose metabolism.degradation.fructose kinase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana Chr1 1 CH_ath_408 2 2 0.000601633
Amborella trichopoda AmTr_v1.0_scaffold00006 1 CH_atr_308 2 2 0.000476644
Magnolia biondii Chr11 1 CH_mbi_647 2 2 0.000728491
Sequoiadendron giganteum chr4 1 CH_sgi_268 4 4 0.00000000000520279
Triticum aestivum Chr5A 1 CH_tae_631 3 3 0.000000508639
Triticum aestivum Chr5B 1 CH_tae_632 3 3 0.000000508639
Triticum dicoccoides 5B 1 CH_tdi_205 3 3 0.000000378041
Arabidopsis thaliana Chr1 2 CH_ath_408 2 2 0.000601633
Amborella trichopoda AmTr_v1.0_scaffold00006 2 CH_atr_308 2 2 0.000476644
Magnolia biondii Chr11 2 CH_mbi_647 2 2 0.000728491
Sequoiadendron giganteum chr4 2 CH_sgi_268 4 4 0.00000000000520279
Triticum aestivum Chr5A 2 CH_tae_631 3 3 0.000000508639
Triticum aestivum Chr5B 2 CH_tae_632 3 3 0.000000508639
Triticum dicoccoides 5B 2 CH_tdi_205 3 3 0.000000378041

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001