Functional clusters
Information
- Type MapMan
- Description Multi-process regulation.calcium-dependent signalling.calcium sensor (CML)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr4 | 1 | CH_asa_242 | 4 | 5 | 0.000000799691 |
| Allium sativum | chr8 | 1 | CH_asa_761 | 3 | 4 | 0.000492787 |
| Aegilops tauschii | 3D | 1 | CH_ata_77 | 5 | 7 | 0.00000000962877 |
| Arabidopsis thaliana | Chr2 | 1 | CH_ath_416 | 3 | 6 | 0.000796861 |
| Arabidopsis thaliana | Chr3 | 1 | CH_ath_417 | 3 | 5 | 0.000796861 |
| Calamus simplicifolius | scaffold18 | 1 | CH_calsi_107 | 4 | 5 | 0.00000192275 |
| Cenchrus purpureus | GWHAORA00000011 | 1 | CH_cpu_143 | 9 | 48 | 0.000000000126594 |
| Eragrostis curvula | Contig8 | 1 | CH_ecu_288 | 4 | 5 | 0.000000201216 |
| Hordeum vulgare | chr3H | 1 | CH_hvu_212 | 4 | 6 | 0.00000474561 |
| Magnolia biondii | Chr16 | 1 | CH_mbi_375 | 3 | 3 | 0.0000828831 |
| Magnolia biondii | Chr01 | 1 | CH_mbi_542 | 3 | 4 | 0.000331223 |
| Marchantia polymorpha | scaffold_42 | 1 | CH_mpo_30 | 4 | 5 | 0.00000012086 |
| Miscanthus sinensis | Chr05 | 1 | CH_msi_523 | 3 | 3 | 0.000394175 |
| Oryza alta | GWHAZTO00000013 | 1 | CH_oal_794 | 3 | 4 | 0.000773471 |
| Oryza brachyantha | 1 | 1 | CH_obr_243 | 3 | 3 | 0.000233789 |
| Oryza sativa ssp. indica | Chr1 | 1 | CH_osaindica_256 | 3 | 3 | 0.000105029 |
| Oryza sativa Kitaake | Chr1 | 1 | CH_osak_386 | 3 | 3 | 0.000238164 |
| Oryza sativa Kitaake | Chr3 | 1 | CH_osak_488 | 3 | 4 | 0.000951322 |
| Oryza sativa ssp. japonica | chr01 | 1 | CH_osa_283 | 3 | 3 | 0.000166143 |
| Phyllostachys edulis | hic_scaffold_14 | 1 | CH_ped_469 | 3 | 3 | 0.000647818 |
| Physcomitrium patens | Chr13 | 1 | CH_ppa_272 | 3 | 5 | 0.00055543 |
| Sorghum bicolor | Chr03 | 1 | CH_sbi_360 | 3 | 3 | 0.000225524 |
| Secale cereale | GWHASIY00000006 | 1 | CH_sce_77 | 7 | 11 | 0.00000000000424335 |
| Secale cereale | GWHASIY00000001 | 1 | CH_sce_860 | 3 | 3 | 0.000533886 |
| Sequoiadendron giganteum | chr8 | 1 | CH_sgi_1004 | 3 | 4 | 0.000130045 |
| Sequoiadendron giganteum | chr1 | 1 | CH_sgi_343 | 6 | 20 | 0.000000000773071 |
| Sequoiadendron giganteum | chr2 | 1 | CH_sgi_702 | 3 | 3 | 0.0000325333 |
| Solanum lycopersicum | SL4.0ch11 | 1 | CH_sly_450 | 3 | 3 | 0.000321407 |
| Saccharum spontaneum | Chr3C | 1 | CH_ssp_1161 | 3 | 3 | 0.000650963 |
| Saccharum spontaneum | Chr3B | 1 | CH_ssp_1162 | 3 | 3 | 0.000650963 |
| Saccharum spontaneum | Chr3C | 1 | CH_ssp_43 | 7 | 8 | 0.0000000000000734252 |
| Setaria viridis | Chr_05 | 1 | CH_svi_380 | 3 | 3 | 0.000233421 |
| Triticum aestivum | Chr3D | 1 | CH_tae_142 | 7 | 7 | 0.0000000000000156647 |
| Triticum aestivum | Chr7A | 1 | CH_tae_1469 | 3 | 3 | 0.000931524 |
| Triticum aestivum | Chr7B | 1 | CH_tae_1470 | 3 | 3 | 0.000931524 |
| Triticum aestivum | Chr3D | 1 | CH_tae_1471 | 3 | 3 | 0.000931524 |
| Triticum aestivum | Chr3A | 1 | CH_tae_229 | 6 | 6 | 0.00000000000778927 |
| Triticum aestivum | Chr3B | 1 | CH_tae_856 | 5 | 15 | 0.0000113831 |
| Triticum turgidum | chr4A | 1 | CH_ttu_520 | 6 | 63 | 0.000117934 |
| Triticum turgidum | chr7A | 1 | CH_ttu_633 | 3 | 3 | 0.000361762 |
| Triticum turgidum | chr1B | 1 | CH_ttu_634 | 3 | 3 | 0.000361762 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00009.1 | 1 | CH_zjn_30 | 4 | 4 | 0.000000131325 |
| Allium sativum | chr4 | 2 | CH_asa_242 | 4 | 5 | 0.000000799691 |
| Allium sativum | chr8 | 2 | CH_asa_761 | 3 | 4 | 0.000492787 |
| Aegilops tauschii | 3D | 2 | CH_ata_77 | 5 | 7 | 0.00000000962877 |
| Arabidopsis thaliana | Chr2 | 2 | CH_ath_416 | 3 | 6 | 0.000796861 |
| Arabidopsis thaliana | Chr3 | 2 | CH_ath_417 | 3 | 5 | 0.000796861 |
| Calamus simplicifolius | scaffold18 | 2 | CH_calsi_107 | 4 | 5 | 0.00000192275 |
| Cenchrus purpureus | GWHAORA00000011 | 2 | CH_cpu_143 | 9 | 48 | 0.000000000126594 |
| Eragrostis curvula | Contig8 | 2 | CH_ecu_288 | 4 | 5 | 0.000000201216 |
| Hordeum vulgare | chr3H | 2 | CH_hvu_212 | 4 | 6 | 0.00000474561 |
| Magnolia biondii | Chr16 | 2 | CH_mbi_375 | 3 | 3 | 0.0000828831 |
| Magnolia biondii | Chr01 | 2 | CH_mbi_542 | 3 | 4 | 0.000331223 |
| Marchantia polymorpha | scaffold_42 | 2 | CH_mpo_30 | 4 | 5 | 0.00000012086 |
| Miscanthus sinensis | Chr05 | 2 | CH_msi_523 | 3 | 3 | 0.000394175 |
| Oryza alta | GWHAZTO00000013 | 2 | CH_oal_794 | 3 | 4 | 0.000773471 |
| Oryza brachyantha | 1 | 2 | CH_obr_243 | 3 | 3 | 0.000233789 |
| Oryza sativa ssp. indica | Chr1 | 2 | CH_osaindica_256 | 3 | 3 | 0.000105029 |
| Oryza sativa Kitaake | Chr1 | 2 | CH_osak_386 | 3 | 3 | 0.000238164 |
| Oryza sativa Kitaake | Chr3 | 2 | CH_osak_488 | 3 | 4 | 0.000951322 |
| Oryza sativa ssp. japonica | chr01 | 2 | CH_osa_283 | 3 | 3 | 0.000166143 |
| Phyllostachys edulis | hic_scaffold_14 | 2 | CH_ped_469 | 3 | 3 | 0.000647818 |
| Physcomitrium patens | Chr13 | 2 | CH_ppa_272 | 3 | 5 | 0.00055543 |
| Sorghum bicolor | Chr03 | 2 | CH_sbi_360 | 3 | 3 | 0.000225524 |
| Secale cereale | GWHASIY00000006 | 2 | CH_sce_77 | 7 | 11 | 0.00000000000424335 |
| Secale cereale | GWHASIY00000001 | 2 | CH_sce_860 | 3 | 3 | 0.000533886 |
| Sequoiadendron giganteum | chr8 | 2 | CH_sgi_1004 | 3 | 4 | 0.000130045 |
| Sequoiadendron giganteum | chr1 | 2 | CH_sgi_343 | 6 | 20 | 0.000000000773071 |
| Sequoiadendron giganteum | chr2 | 2 | CH_sgi_702 | 3 | 3 | 0.0000325333 |
| Solanum lycopersicum | SL4.0ch11 | 2 | CH_sly_450 | 3 | 3 | 0.000321407 |
| Saccharum spontaneum | Chr3C | 2 | CH_ssp_1161 | 3 | 3 | 0.000650963 |
| Saccharum spontaneum | Chr3B | 2 | CH_ssp_1162 | 3 | 3 | 0.000650963 |
| Saccharum spontaneum | Chr3C | 2 | CH_ssp_43 | 7 | 8 | 0.0000000000000734252 |
| Setaria viridis | Chr_05 | 2 | CH_svi_380 | 3 | 3 | 0.000233421 |
| Triticum aestivum | Chr3D | 2 | CH_tae_142 | 7 | 7 | 0.0000000000000156647 |
| Triticum aestivum | Chr7A | 2 | CH_tae_1469 | 3 | 3 | 0.000931524 |
| Triticum aestivum | Chr7B | 2 | CH_tae_1470 | 3 | 3 | 0.000931524 |
| Triticum aestivum | Chr3D | 2 | CH_tae_1471 | 3 | 3 | 0.000931524 |
| Triticum aestivum | Chr3A | 2 | CH_tae_229 | 6 | 6 | 0.00000000000778927 |
| Triticum aestivum | Chr3B | 2 | CH_tae_856 | 5 | 15 | 0.0000113831 |
| Triticum turgidum | chr4A | 2 | CH_ttu_520 | 6 | 63 | 0.000117934 |
| Triticum turgidum | chr7A | 2 | CH_ttu_633 | 3 | 3 | 0.000361762 |
| Triticum turgidum | chr1B | 2 | CH_ttu_634 | 3 | 3 | 0.000361762 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00009.1 | 2 | CH_zjn_30 | 4 | 4 | 0.000000131325 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |