Functional clusters
Information
- Type MapMan
- Description External stimuli response.pathogen.effector-triggered immunity (ETI) network.TNL-mediated effector-triggered immunity.regulatory protein (NRG)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis thaliana | Chr5 | 1 | CH_ath_71 | 3 | 3 | 0.00000000123118 |
| Glycine max | Gm05 | 1 | CH_gma_192 | 3 | 3 | 0.000000475419 |
| Glycine max | Gm17 | 1 | CH_gma_31 | 6 | 10 | 3.43826e-16 |
| Populus trichocarpa | Chr07 | 1 | CH_ptr_86 | 4 | 7 | 0.0000000000202757 |
| Arabidopsis thaliana | Chr5 | 2 | CH_ath_71 | 3 | 3 | 0.00000000123118 |
| Glycine max | Gm05 | 2 | CH_gma_192 | 3 | 3 | 0.000000475419 |
| Glycine max | Gm17 | 2 | CH_gma_31 | 6 | 10 | 3.43826e-16 |
| Populus trichocarpa | Chr07 | 2 | CH_ptr_86 | 4 | 7 | 0.0000000000202757 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |