Functional clusters

Information

  • Type MapMan
  • Description External stimuli response.temperature.cold response.cold-responsive mRNA chaperone (CSD)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr1 1 CH_asa_312 3 5 0.00000819731
Hordeum vulgare chr2H 1 CH_hvu_102 3 3 0.00000000247059
Phyllostachys edulis hic_scaffold_20 1 CH_ped_232 3 4 0.00000965009
Physcomitrium patens scaffold_42 1 CH_ppa_341 2 2 0.000919089
Secale cereale GWHASIY00000002 1 CH_sce_399 3 20 0.0000141693
Allium sativum chr1 2 CH_asa_312 3 5 0.00000819731
Hordeum vulgare chr2H 2 CH_hvu_102 3 3 0.00000000247059
Phyllostachys edulis hic_scaffold_20 2 CH_ped_232 3 4 0.00000965009
Physcomitrium patens scaffold_42 2 CH_ppa_341 2 2 0.000919089
Secale cereale GWHASIY00000002 2 CH_sce_399 3 20 0.0000141693

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001