Functional clusters

Information

  • Type MapMan
  • Description External stimuli response.light.red/far red light.phytochrome photoreceptor (PHY)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Asparagus officinalis AsparagusV1_07 1 CH_aof_176 2 2 0.000453549
Allium sativum chr4 1 CH_asa_649 2 2 0.000232522
Amborella trichopoda AmTr_v1.0_scaffold00047 1 CH_atr_307 2 2 0.000476644
Brachypodium distachyon Bd1 1 CH_bdi_291 2 2 0.000370005
Eragrostis curvula 3 1 CH_ecu_383 3 5 0.00000270534
Sequoiadendron giganteum chr6 1 CH_sgi_1329 2 4 0.000487151
Asparagus officinalis AsparagusV1_07 2 CH_aof_176 2 2 0.000453549
Allium sativum chr4 2 CH_asa_649 2 2 0.000232522
Amborella trichopoda AmTr_v1.0_scaffold00047 2 CH_atr_307 2 2 0.000476644
Brachypodium distachyon Bd1 2 CH_bdi_291 2 2 0.000370005
Eragrostis curvula 3 2 CH_ecu_383 3 5 0.00000270534
Sequoiadendron giganteum chr6 2 CH_sgi_1329 2 4 0.000487151

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001