Functional clusters

Information

  • Type MapMan
  • Description Nutrient uptake.metal homeostasis.iron.chelation-based strategy uptake.phytosiderophore biosynthesis.nicotianamine amino transferase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Hordeum vulgare chr1H 1 CH_hvu_268 2 2 0.0000405836
Sorghum bicolor Chr02 1 CH_sbi_320 2 3 0.000176
Secale cereale GWHASIY00000001 1 CH_sce_710 2 2 0.000273174
Triticum aestivum Chr1A 1 CH_tae_1133 2 2 0.000187066
Triticum aestivum Chr1B 1 CH_tae_1134 2 2 0.000187066
Triticum turgidum chr1B 1 CH_ttu_499 2 2 0.0000937603
Hordeum vulgare chr1H 2 CH_hvu_268 2 2 0.0000405836
Sorghum bicolor Chr02 2 CH_sbi_320 2 3 0.000176
Secale cereale GWHASIY00000001 2 CH_sce_710 2 2 0.000273174
Triticum aestivum Chr1A 2 CH_tae_1133 2 2 0.000187066
Triticum aestivum Chr1B 2 CH_tae_1134 2 2 0.000187066
Triticum turgidum chr1B 2 CH_ttu_499 2 2 0.0000937603

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001