Functional clusters

Information

  • Type MapMan
  • Description Nutrient uptake.nitrogen assimilation.nitrate assimilation.nitrate reductase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Digitaria exilis Dexi_CM05836_chr06B 1 CH_dex_743 2 2 0.000935766
Digitaria exilis Dexi_CM05836_chr06A 1 CH_dex_744 2 2 0.000935766
Glycine max Gm14 1 CH_gma_461 2 2 0.000227734
Magnolia biondii Chr03 1 CH_mbi_593 2 5 0.000485625
Oryza alta GWHAZTO00000002 1 CH_oal_593 2 2 0.000201513
Oryza sativa Kitaake Chr8 1 CH_osak_441 2 3 0.000506548
Panicum hallii Chr06 1 CH_pha_370 2 2 0.000348665
Vanilla planifolia CM028154.1 1 CH_vpl_189 2 2 0.000073888
Digitaria exilis Dexi_CM05836_chr06B 2 CH_dex_743 2 2 0.000935766
Digitaria exilis Dexi_CM05836_chr06A 2 CH_dex_744 2 2 0.000935766
Glycine max Gm14 2 CH_gma_461 2 2 0.000227734
Magnolia biondii Chr03 2 CH_mbi_593 2 5 0.000485625
Oryza alta GWHAZTO00000002 2 CH_oal_593 2 2 0.000201513
Oryza sativa Kitaake Chr8 2 CH_osak_441 2 3 0.000506548
Panicum hallii Chr06 2 CH_pha_370 2 2 0.000348665
Vanilla planifolia CM028154.1 2 CH_vpl_189 2 2 0.000073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001