Functional clusters

Information

  • Type MapMan
  • Description Solute transport.channels.VIC superfamily.voltage-gated potassium cation channel (AKT/SKOR/GORK)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_362 1 CH_aag_27 4 12 0.0000000965824
Chlamydomonas reinhardtii chromosome_1 1 CH_cre_7 4 5 0.000000000331021
Hordeum vulgare chr7H 1 CH_hvu_222 3 6 0.00000814948
Sorghum bicolor Chr09 1 CH_sbi_300 3 9 0.0000714723
Secale cereale GWHASIY00000004 1 CH_sce_653 3 12 0.000150257
Sequoiadendron giganteum chr1 1 CH_sgi_332 5 23 0.000000000357412
Saccharum spontaneum Chr7A 1 CH_ssp_114 4 4 0.00000000111666
Triticum aestivum Chr7A 1 CH_tae_861 3 4 0.0000125614
Triticum aestivum Chr7B 1 CH_tae_862 3 4 0.0000125614
Triticum aestivum Chr7D 1 CH_tae_863 3 4 0.0000125614
Triticum turgidum chr7A 1 CH_ttu_391 3 4 0.00000779303
Triticum turgidum chr7B 1 CH_ttu_392 3 4 0.00000779303
Anthoceros agrestis Sc2ySwM_362 2 CH_aag_27 4 12 0.0000000965824
Chlamydomonas reinhardtii chromosome_1 2 CH_cre_7 4 5 0.000000000331021
Hordeum vulgare chr7H 2 CH_hvu_222 3 6 0.00000814948
Sorghum bicolor Chr09 2 CH_sbi_300 3 9 0.0000714723
Secale cereale GWHASIY00000004 2 CH_sce_653 3 12 0.000150257
Sequoiadendron giganteum chr1 2 CH_sgi_332 5 23 0.000000000357412
Saccharum spontaneum Chr7A 2 CH_ssp_114 4 4 0.00000000111666
Triticum aestivum Chr7A 2 CH_tae_861 3 4 0.0000125614
Triticum aestivum Chr7B 2 CH_tae_862 3 4 0.0000125614
Triticum aestivum Chr7D 2 CH_tae_863 3 4 0.0000125614
Triticum turgidum chr7A 2 CH_ttu_391 3 4 0.00000779303
Triticum turgidum chr7B 2 CH_ttu_392 3 4 0.00000779303

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001