Functional clusters

Information

  • Type MapMan
  • Description Solute transport.primary active transport.P-type ATPase superfamily.P5 family.P5-type cation-transporting ATPase (MIA)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00110 1 CH_atr_185 2 2 0.0000794407
Miscanthus sinensis Chr17 1 CH_msi_431 2 2 0.000193193
Miscanthus sinensis Chr16 1 CH_msi_432 2 2 0.000193193
Physcomitrium patens Chr14 1 CH_ppa_235 2 2 0.000367636
Sequoiadendron giganteum chr2 1 CH_sgi_406 3 3 0.00000000355983
Amborella trichopoda AmTr_v1.0_scaffold00110 2 CH_atr_185 2 2 0.0000794407
Miscanthus sinensis Chr17 2 CH_msi_431 2 2 0.000193193
Miscanthus sinensis Chr16 2 CH_msi_432 2 2 0.000193193
Physcomitrium patens Chr14 2 CH_ppa_235 2 2 0.000367636
Sequoiadendron giganteum chr2 2 CH_sgi_406 3 3 0.00000000355983

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001