Functional clusters
Information
- Type MapMan
- Description Solute transport.primary active transport.P-type ATPase superfamily.P1 family.P1B-type heavy metal cation-transporting ATPase (HMA)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Magnolia biondii | Chr17 | 1 | CH_mbi_298 | 3 | 7 | 0.0000272227 |
| Oryza alta | GWHAZTO00000007 | 1 | CH_oal_222 | 3 | 3 | 0.000000938046 |
| Physcomitrium patens | Chr01 | 1 | CH_ppa_2 | 8 | 11 | 1.27329e-20 |
| Sequoiadendron giganteum | chr7 | 1 | CH_sgi_618 | 3 | 3 | 0.00000199351 |
| Sequoiadendron giganteum | chr7 | 1 | CH_sgi_662 | 3 | 4 | 0.00000797194 |
| Magnolia biondii | Chr17 | 2 | CH_mbi_298 | 3 | 7 | 0.0000272227 |
| Oryza alta | GWHAZTO00000007 | 2 | CH_oal_222 | 3 | 3 | 0.000000938046 |
| Physcomitrium patens | Chr01 | 2 | CH_ppa_2 | 8 | 11 | 1.27329e-20 |
| Sequoiadendron giganteum | chr7 | 2 | CH_sgi_618 | 3 | 3 | 0.00000199351 |
| Sequoiadendron giganteum | chr7 | 2 | CH_sgi_662 | 3 | 4 | 0.00000797194 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |