Functional clusters

Information

  • Type MapMan
  • Description Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).central subcomplex.nucleoporin (NUP98)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Calamus simplicifolius scaffold393 1 CH_calsi_222 2 2 0.000201396
Cenchrus purpureus GWHAORA00000001 1 CH_cpu_871 2 2 0.000865587
Oryza alta GWHAZTO00000024 1 CH_oal_737 2 3 0.000604522
Oryza sativa ssp. indica Chr12 1 CH_osaindica_277 2 2 0.000154983
Oryza sativa Kitaake Chr12 1 CH_osak_354 2 2 0.000168857
Oryza sativa ssp. japonica chr12 1 CH_osa_263 2 2 0.000158437
Calamus simplicifolius scaffold393 2 CH_calsi_222 2 2 0.000201396
Cenchrus purpureus GWHAORA00000001 2 CH_cpu_871 2 2 0.000865587
Oryza alta GWHAZTO00000024 2 CH_oal_737 2 3 0.000604522
Oryza sativa ssp. indica Chr12 2 CH_osaindica_277 2 2 0.000154983
Oryza sativa Kitaake Chr12 2 CH_osak_354 2 2 0.000168857
Oryza sativa ssp. japonica chr12 2 CH_osa_263 2 2 0.000158437

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001