Functional clusters

Information

  • Type MapMan
  • Description Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).linker subcomplex.scaffold nucleoporin (NUP88)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Sequoiadendron giganteum chr9 1 CH_sgi_386 3 3 0.00000000355983
Solanum lycopersicum SL4.0ch11 1 CH_sly_456 2 2 0.000352164
Solanum lycopersicum SL4.0ch11 1 CH_sly_457 2 2 0.000352164
Saccharum spontaneum Chr5D 1 CH_ssp_1216 2 5 0.000715726
Sequoiadendron giganteum chr9 2 CH_sgi_386 3 3 0.00000000355983
Solanum lycopersicum SL4.0ch11 2 CH_sly_456 2 2 0.000352164
Solanum lycopersicum SL4.0ch11 2 CH_sly_457 2 2 0.000352164
Saccharum spontaneum Chr5D 2 CH_ssp_1216 2 5 0.000715726

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001