Functional clusters

Information

  • Type MapMan
  • Description Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.scaffold nucleoporin (NUP155)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Asparagus officinalis AsparagusV1_03 1 CH_aof_61 2 2 0.0000755915
Allium sativum chr1 1 CH_asa_490 2 2 0.000116261
Ceratophyllum demersum 4 1 CH_cde_218 2 2 0.000473878
Ceratophyllum demersum 5 1 CH_cde_219 2 2 0.000473878
Cenchrus purpureus GWHAORA00000012 1 CH_cpu_664 2 2 0.000185483
Oryza alta GWHAZTO00000001 1 CH_oal_155 3 5 0.000000060909
Sequoiadendron giganteum chr9 1 CH_sgi_768 2 2 0.0000487151
Asparagus officinalis AsparagusV1_03 2 CH_aof_61 2 2 0.0000755915
Allium sativum chr1 2 CH_asa_490 2 2 0.000116261
Ceratophyllum demersum 4 2 CH_cde_218 2 2 0.000473878
Ceratophyllum demersum 5 2 CH_cde_219 2 2 0.000473878
Cenchrus purpureus GWHAORA00000012 2 CH_cpu_664 2 2 0.000185483
Oryza alta GWHAZTO00000001 2 CH_oal_155 3 5 0.000000060909
Sequoiadendron giganteum chr9 2 CH_sgi_768 2 2 0.0000487151

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001