Functional clusters
Information
- Type MapMan
- Description Vesicle trafficking.exocytic trafficking.exocytosis regulation.regulatory protein (SCAMP)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Cenchrus purpureus | GWHAORA00000004 | 1 | CH_cpu_460 | 4 | 20 | 0.00000639052 |
| Cenchrus purpureus | GWHAORA00000001 | 1 | CH_cpu_777 | 3 | 10 | 0.000446375 |
| Cenchrus purpureus | GWHAORA00000010 | 1 | CH_cpu_865 | 3 | 12 | 0.000817893 |
| Lolium perenne | Lp_chr4_0 | 1 | CH_lpe_433 | 2 | 2 | 0.000899989 |
| Saccharum spontaneum | Chr1A | 1 | CH_ssp_830 | 3 | 10 | 0.000207101 |
| Cenchrus purpureus | GWHAORA00000004 | 2 | CH_cpu_460 | 4 | 20 | 0.00000639052 |
| Cenchrus purpureus | GWHAORA00000001 | 2 | CH_cpu_777 | 3 | 10 | 0.000446375 |
| Cenchrus purpureus | GWHAORA00000010 | 2 | CH_cpu_865 | 3 | 12 | 0.000817893 |
| Lolium perenne | Lp_chr4_0 | 2 | CH_lpe_433 | 2 | 2 | 0.000899989 |
| Saccharum spontaneum | Chr1A | 2 | CH_ssp_830 | 3 | 10 | 0.000207101 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |