Functional clusters
Information
- Type MapMan
- Description Vesicle trafficking.endocytic trafficking.Retromer-mediated protein recycling
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr2 | 1 | CH_asa_693 | 3 | 13 | 0.00036006 |
| Allium sativum | chr2 | 2 | CH_asa_693 | 3 | 13 | 0.00036006 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| 22.4.2.1.1 | Vesicle trafficking.endocytic trafficking.Retromer-mediated protein recycling.Retromer complex.component VPS35 | 4 |
| 22.4.2.1.2 | Vesicle trafficking.endocytic trafficking.Retromer-mediated protein recycling.Retromer complex.component VPS29 | 6 |
| 22.4.2.1.3 | Vesicle trafficking.endocytic trafficking.Retromer-mediated protein recycling.Retromer complex.component VPS26 | 2 |
| 22.4.2.3 | Vesicle trafficking.endocytic trafficking.Retromer-mediated protein recycling.regulatory factor (SNX2) | 2 |
| 22.4.2.4.1 | Vesicle trafficking.endocytic trafficking.Retromer-mediated protein recycling.BLOC-1 regulatory complex.component BLOS1 | 2 |
| 22.4.2.4.2 | Vesicle trafficking.endocytic trafficking.Retromer-mediated protein recycling.BLOC-1 regulatory complex.component BLOS2 | 4 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |