Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.VPS4-VTA1 ESCRT-disassembly complex.ATPase component VPS4/SKD1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Lolium perenne Lp_chr6_0 1 CH_lpe_290 2 2 0.0000964274
Oryza alta GWHAZTO00000013 1 CH_oal_760 2 4 0.000725414
Oryza sativa ssp. indica Chr1 1 CH_osaindica_216 2 2 0.0000516609
Oryza sativa Kitaake Chr1 1 CH_osak_366 2 2 0.000168857
Solanum lycopersicum SL4.0ch11 1 CH_sly_413 2 2 0.000176082
Lolium perenne Lp_chr6_0 2 CH_lpe_290 2 2 0.0000964274
Oryza alta GWHAZTO00000013 2 CH_oal_760 2 4 0.000725414
Oryza sativa ssp. indica Chr1 2 CH_osaindica_216 2 2 0.0000516609
Oryza sativa Kitaake Chr1 2 CH_osak_366 2 2 0.000168857
Solanum lycopersicum SL4.0ch11 2 CH_sly_413 2 2 0.000176082

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001