Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.Qa-type SNARE components.SYP3-group component

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr6 1 CH_asa_713 2 2 0.000387537
Allium sativum chr4 1 CH_asa_714 2 2 0.000387537
Glycine max Gm04 1 CH_gma_493 2 2 0.000379557
Glycine max Gm06 1 CH_gma_494 2 2 0.000379557
Sequoiadendron giganteum chr9 1 CH_sgi_1299 2 2 0.000487151
Sequoiadendron giganteum chr6 1 CH_sgi_1300 2 2 0.000487151
Saccharum spontaneum Chr3C 1 CH_ssp_1174 2 2 0.00066805
Setaria viridis Chr_03 1 CH_svi_346 2 2 0.000156535
Vanilla planifolia CM028158.1 1 CH_vpl_133 3 35 0.0000535366
Allium sativum chr6 2 CH_asa_713 2 2 0.000387537
Allium sativum chr4 2 CH_asa_714 2 2 0.000387537
Glycine max Gm04 2 CH_gma_493 2 2 0.000379557
Glycine max Gm06 2 CH_gma_494 2 2 0.000379557
Sequoiadendron giganteum chr9 2 CH_sgi_1299 2 2 0.000487151
Sequoiadendron giganteum chr6 2 CH_sgi_1300 2 2 0.000487151
Saccharum spontaneum Chr3C 2 CH_ssp_1174 2 2 0.00066805
Setaria viridis Chr_03 2 CH_svi_346 2 2 0.000156535
Vanilla planifolia CM028158.1 2 CH_vpl_133 3 35 0.0000535366

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001