Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.post-Golgi trafficking.vesicle tethering.TRAPP-II complex-specific components.component TRS130/CLUB

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00003 1 CH_atr_251 2 2 0.000238322
Sequoiadendron giganteum chr1 1 CH_sgi_852 2 2 0.0000487151
Saccharum spontaneum Chr2B 1 CH_ssp_998 2 2 0.000357884
Saccharum spontaneum Chr2D 1 CH_ssp_999 2 2 0.000357884
Vanilla planifolia CM028159.1 1 CH_vpl_239 2 3 0.000221656
Amborella trichopoda AmTr_v1.0_scaffold00003 2 CH_atr_251 2 2 0.000238322
Sequoiadendron giganteum chr1 2 CH_sgi_852 2 2 0.0000487151
Saccharum spontaneum Chr2B 2 CH_ssp_998 2 2 0.000357884
Saccharum spontaneum Chr2D 2 CH_ssp_999 2 2 0.000357884
Vanilla planifolia CM028159.1 2 CH_vpl_239 2 3 0.000221656

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001