Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase activities.D-class RAB GTPase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Asparagus officinalis AsparagusV1_08 1 CH_aof_164 2 2 0.000453549
Brachypodium distachyon Bd1 1 CH_bdi_321 2 2 0.000616675
Miscanthus sinensis Chr07 1 CH_msi_599 2 2 0.000676176
Oryza alta GWHAZTO00000002 1 CH_oal_262 3 7 0.00000255766
Oryza brachyantha 1 1 CH_obr_290 2 3 0.000597336
Secale cereale GWHASIY00000003 1 CH_sce_722 2 2 0.000273174
Triticum aestivum Chr3A 1 CH_tae_252 4 4 0.000000000035743
Triticum dicoccoides 3A 1 CH_tdi_582 2 2 0.000623386
Asparagus officinalis AsparagusV1_08 2 CH_aof_164 2 2 0.000453549
Brachypodium distachyon Bd1 2 CH_bdi_321 2 2 0.000616675
Miscanthus sinensis Chr07 2 CH_msi_599 2 2 0.000676176
Oryza alta GWHAZTO00000002 2 CH_oal_262 3 7 0.00000255766
Oryza brachyantha 1 2 CH_obr_290 2 3 0.000597336
Secale cereale GWHASIY00000003 2 CH_sce_722 2 2 0.000273174
Triticum aestivum Chr3A 2 CH_tae_252 4 4 0.000000000035743
Triticum dicoccoides 3A 2 CH_tdi_582 2 2 0.000623386

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001