Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.post-Golgi trafficking.coat protein recruiting

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brachypodium distachyon Bd2 1 CH_bdi_209 3 4 0.0000747062
Lolium perenne Lp_chr3_0 1 CH_lpe_422 3 11 0.000835567
Saccharum spontaneum Chr2A 1 CH_ssp_816 4 17 0.000159785
Brachypodium distachyon Bd2 2 CH_bdi_209 3 4 0.0000747062
Lolium perenne Lp_chr3_0 2 CH_lpe_422 3 11 0.000835567
Saccharum spontaneum Chr2A 2 CH_ssp_816 4 17 0.000159785

Available child term results

Ontology identifier Description Number of clusters
22.3.2.1 Vesicle trafficking.post-Golgi trafficking.coat protein recruiting.ARF-GTPase 4
22.3.2.2.1 Vesicle trafficking.post-Golgi trafficking.coat protein recruiting.ARF-GTPase guanyl-nucleotide exchange.ARF-GEF factor (GBF) 6
22.3.2.2.2 Vesicle trafficking.post-Golgi trafficking.coat protein recruiting.ARF-GTPase guanyl-nucleotide exchange.ARF-GEF factor (BIG) 6
22.3.2.3.1 Vesicle trafficking.post-Golgi trafficking.coat protein recruiting.ARF-GTPase activation.class I ARF-GAP protein 10
22.3.2.3.3 Vesicle trafficking.post-Golgi trafficking.coat protein recruiting.ARF-GTPase activation.class III ARF-GAP protein 2
22.3.2.3.4 Vesicle trafficking.post-Golgi trafficking.coat protein recruiting.ARF-GTPase activation.class IV ARF-GAP protein 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001