Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.TPLATE cargo co-adaptor complex.component TWD40

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Asparagus officinalis AsparagusV1_04 1 CH_aof_128 2 2 0.000226775
Allium sativum chr7_2 1 CH_asa_514 2 2 0.000116261
Ceratophyllum demersum 3 1 CH_cde_227 2 2 0.000473878
Oryza sativa ssp. japonica chr09 1 CH_osa_273 2 2 0.000158437
Spirodela polyrhiza pseudo4 1 CH_spo_178 2 2 0.000305764
Vanilla planifolia CM028151.1 1 CH_vpl_127 3 15 0.0000372207
Zostera marina Chr03 1 CH_zosmarina_169 2 2 0.000289673
Asparagus officinalis AsparagusV1_04 2 CH_aof_128 2 2 0.000226775
Allium sativum chr7_2 2 CH_asa_514 2 2 0.000116261
Ceratophyllum demersum 3 2 CH_cde_227 2 2 0.000473878
Oryza sativa ssp. japonica chr09 2 CH_osa_273 2 2 0.000158437
Spirodela polyrhiza pseudo4 2 CH_spo_178 2 2 0.000305764
Vanilla planifolia CM028151.1 2 CH_vpl_127 3 15 0.0000372207
Zostera marina Chr03 2 CH_zosmarina_169 2 2 0.000289673

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001