Functional clusters
Information
- Type MapMan
- Description Vesicle trafficking.Golgi-ER retrograde trafficking.vesicle tethering.COG tethering complex.component COG7
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Ceratophyllum demersum | 2 | 1 | CH_cde_21 | 3 | 4 | 0.0000000374266 |
| Digitaria exilis | Dexi_CM05836_chr04B | 1 | CH_dex_439 | 2 | 2 | 0.000100261 |
| Oryza alta | GWHAZTO00000018 | 1 | CH_oal_91 | 3 | 3 | 0.00000000243648 |
| Sequoiadendron giganteum | chr7 | 1 | CH_sgi_130 | 5 | 5 | 4.22455e-17 |
| Saccharum spontaneum | Chr8A | 1 | CH_ssp_202 | 3 | 4 | 0.0000000683081 |
| Vanilla planifolia | CM028151.1 | 1 | CH_vpl_71 | 3 | 11 | 0.00000135086 |
| Ceratophyllum demersum | 2 | 2 | CH_cde_21 | 3 | 4 | 0.0000000374266 |
| Digitaria exilis | Dexi_CM05836_chr04B | 2 | CH_dex_439 | 2 | 2 | 0.000100261 |
| Oryza alta | GWHAZTO00000018 | 2 | CH_oal_91 | 3 | 3 | 0.00000000243648 |
| Sequoiadendron giganteum | chr7 | 2 | CH_sgi_130 | 5 | 5 | 4.22455e-17 |
| Saccharum spontaneum | Chr8A | 2 | CH_ssp_202 | 3 | 4 | 0.0000000683081 |
| Vanilla planifolia | CM028151.1 | 2 | CH_vpl_71 | 3 | 11 | 0.00000135086 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |