Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.Golgi-ER retrograde trafficking.vesicle tethering.COG tethering complex.component COG1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Asparagus officinalis AsparagusV1_07 1 CH_aof_80 2 2 0.0000755915
Chara braunii BFEA01000480 1 CH_cbr_89 2 3 0.000215773
Oryza alta GWHAZTO00000012 1 CH_oal_90 3 3 0.00000000243648
Sequoiadendron giganteum chr8 1 CH_sgi_668 3 3 0.0000104125
Saccharum spontaneum Chr3C 1 CH_ssp_674 2 2 0.0000715768
Asparagus officinalis AsparagusV1_07 2 CH_aof_80 2 2 0.0000755915
Chara braunii BFEA01000480 2 CH_cbr_89 2 3 0.000215773
Oryza alta GWHAZTO00000012 2 CH_oal_90 3 3 0.00000000243648
Sequoiadendron giganteum chr8 2 CH_sgi_668 3 3 0.0000104125
Saccharum spontaneum Chr3C 2 CH_ssp_674 2 2 0.0000715768

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001