Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.Golgi-ER retrograde trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.subunit delta

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cenchrus purpureus GWHAORA00000014 1 CH_cpu_398 4 41 0.0000018787
Magnolia biondii Chr15 1 CH_mbi_599 2 2 0.000485661
Miscanthus sinensis Chr07 1 CH_msi_495 2 2 0.000321989
Oryza sativa ssp. indica Chr5 1 CH_osaindica_318 2 2 0.000309965
Oryza sativa Kitaake Chr5 1 CH_osak_400 2 2 0.000337714
Oryza sativa ssp. japonica chr05 1 CH_osa_398 2 4 0.000950562
Phyllostachys edulis hic_scaffold_22 1 CH_ped_423 2 2 0.000407456
Solanum lycopersicum SL4.0ch10 1 CH_sly_399 2 2 0.000176082
Cenchrus purpureus GWHAORA00000014 2 CH_cpu_398 4 41 0.0000018787
Magnolia biondii Chr15 2 CH_mbi_599 2 2 0.000485661
Miscanthus sinensis Chr07 2 CH_msi_495 2 2 0.000321989
Oryza sativa ssp. indica Chr5 2 CH_osaindica_318 2 2 0.000309965
Oryza sativa Kitaake Chr5 2 CH_osak_400 2 2 0.000337714
Oryza sativa ssp. japonica chr05 2 CH_osa_398 2 4 0.000950562
Phyllostachys edulis hic_scaffold_22 2 CH_ped_423 2 2 0.000407456
Solanum lycopersicum SL4.0ch10 2 CH_sly_399 2 2 0.000176082

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001