Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.Golgi-ER retrograde trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.subunit beta

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aegilops tauschii 3D 1 CH_ata_260 2 4 0.000295436
Arabidopsis thaliana Chr4 1 CH_ath_212 2 2 0.0000286492
Secale cereale GWHASIY00000003 1 CH_sce_706 2 2 0.000273174
Secale cereale GWHASIY00000002 1 CH_sce_707 2 2 0.000273174
Triticum aestivum Chr5B 1 CH_tae_1382 2 2 0.000673438
Triticum aestivum Chr3B 1 CH_tae_1383 2 2 0.000673438
Triticum aestivum Chr3D 1 CH_tae_1384 2 2 0.000673438
Triticum turgidum chr3B 1 CH_ttu_608 2 2 0.000312534
Zostera marina Chr06 1 CH_zosmarina_39 3 3 0.0000000139858
Aegilops tauschii 3D 2 CH_ata_260 2 4 0.000295436
Arabidopsis thaliana Chr4 2 CH_ath_212 2 2 0.0000286492
Secale cereale GWHASIY00000003 2 CH_sce_706 2 2 0.000273174
Secale cereale GWHASIY00000002 2 CH_sce_707 2 2 0.000273174
Triticum aestivum Chr5B 2 CH_tae_1382 2 2 0.000673438
Triticum aestivum Chr3B 2 CH_tae_1383 2 2 0.000673438
Triticum aestivum Chr3D 2 CH_tae_1384 2 2 0.000673438
Triticum turgidum chr3B 2 CH_ttu_608 2 2 0.000312534
Zostera marina Chr06 2 CH_zosmarina_39 3 3 0.0000000139858

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001